BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027E08LP1|AL428740
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1329 1768 0.0
>3x_Contig1329
Length = 7405
Score = 1768 bits (892), Expect = 0.0
Identities = 899/900 (99%), Gaps = 1/900 (0%)
Strand = Plus / Plus
Query: 1 gatcgaattccaacctcaaattggtgctaccatggatggtgaagtcgctcaaactactca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gatcgaattccaacctcaaattggtgctaccatggatggtgaagtcgctcaaactactca 492
Query: 61 aaagattttgaagaaacaaggtctcgactttaagttgagcaccaaggtcttgtctgcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aaagattttgaagaaacaaggtctcgactttaagttgagcaccaaggtcttgtctgcctc 552
Query: 121 cagaaacggtgacgtcgttgacatcgaagtcgaaggtgccaagaatggtaagaaggaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 cagaaacggtgacgtcgttgacatcgaagtcgaaggtgccaagaatggtaagaaggaatc 612
Query: 181 tctccaagctgatgtcttgttggtcgctgtcggcagaagaccatacgtcgctggtttgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tctccaagctgatgtcttgttggtcgctgtcggcagaagaccatacgtcgctggtttgaa 672
Query: 241 cgctgaaaagatcggtttggaagtcgacaagcgtggtagattggtcattgatgaacaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 cgctgaaaagatcggtttggaagtcgacaagcgtggtagattggtcattgatgaacaatt 732
Query: 301 atccaccaaattcccacacgtcaaggttatcggtgatgttaccttcggtccaatgttggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 atccaccaaattcccacacgtcaaggttatcggtgatgttaccttcggtccaatgttggc 792
Query: 361 tcacaaggctgaagaagaaggtatcgctgctgccgaatacttcaaggtcggccacggtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 tcacaaggctgaagaagaaggtatcgctgctgccgaatacttcaaggtcggccacggtca 852
Query: 421 tgtcaactacggtaacatcccggctgtcatgtactcccacccagaagtcgcttgggtcgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 tgtcaactacggtaacatcccggctgtcatgtactcccacccagaagtcgcttgggtcgg 912
Query: 481 taagaccgaagaacaattaaaggaagctggtattcaatacaagattggaaagttcccatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 taagaccgaagaacaattaaaggaagctggtattcaatacaagattggaaagttcccatt 972
Query: 541 catcgctaactctagagctaaaaccaacatggacaccgaa-gtttcgttaagattttgat 599
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 973 catcgctaactctagagctaaaaccaacatggacaccgaaggtttcgttaagattttgat 1032
Query: 600 cgacgcagaatctgaacgtttactaggtgctcacatcattggtcctaacgctggtgaaat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 cgacgcagaatctgaacgtttactaggtgctcacatcattggtcctaacgctggtgaaat 1092
Query: 660 gatcgctgaagccggtttagcattggaatacggtgcttctgctgaagacatcgctagagt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 gatcgctgaagccggtttagcattggaatacggtgcttctgctgaagacatcgctagagt 1152
Query: 720 ttgtcacgctcatccaactctatccgaagctttcaaggaagctaacttagctgcttacgc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1153 ttgtcacgctcatccaactctatccgaagctttcaaggaagctaacttagctgcttacgc 1212
Query: 780 caagccaatcaacttctaatttttcttgataaagcgaagtggaaaaaaaaaattgcggat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1213 caagccaatcaacttctaatttttcttgataaagcgaagtggaaaaaaaaaattgcggat 1272
Query: 840 aattgaagctgcttgatatcaataactataataagctacttaacaatggtacgtcgtatc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1273 aattgaagctgcttgatatcaataactataataagctacttaacaatggtacgtcgtatc 1332
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7502
Number of Sequences: 1807
Number of extensions: 7502
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)